Incubator Lesson Spotlight: Bash and R for Metagenomics

Mon, 17 May 2021 00:00:00 +0000

The Incubator Lesson Spotlight highlights a lesson under development by our community in The Carpentries Incubator. In this edition, we look at the progress being made on the {{page.lesson_title}} lesson, and hear from the authors about how The Carpentries community can get involved with the ongoing development of this lesson.

Lesson Profile

Title: {{page.lesson_title}}
Lesson Pages: https://carpentries-incubator.github.io/metagenomics/
Lesson Repository: https://github.com/carpentries-incubator/metagenomics

Learning Objectives

Acknowledge the importance of well-organized bioinformatics projects and apply this sense of tidiness to metagenomics data.
Learn and implement the guidelines for reproducible metagenomics projects.
Understand and apply the basics for Bash and R programming languages.
Use of Bash and R programming languages to assess and manipulate metagenomics data.
Learn and use the steps and tools for a complete analysis of shotgun and 16S metagenomics data.

Target Audience

Genomics and metagenomics enthusiasts; newcomers to the bioinformatics world; biological science undergraduate, postgraduate students and researchers. We do not assume previous knowledge of Bash, R or metagenomics for the lesson.

Jesús Abraham Avelar Rivas on The Carpentries

Incubator Lesson Spotlight: Bash and R for Metagenomics

Lesson Profile

Learning Objectives

Target Audience